CDS
| Accession Number | TCMCG065C26820 |
| gbkey | CDS |
| Protein Id | XP_012703377.1 |
| Location | complement(join(35492215..35492292,35492378..35492506,35492607..35492692,35492796..35492871,35492992..35493135,35493232..35493369,35493734..35493834,35494120..35494222,35494418..35494543,35494691..35494768,35494857..35495009,35495324..35495425,35495514..35495581,35496299..35496407,35496512..35496673)) |
| Gene | LOC101784528 |
| GeneID | 101784528 |
| Organism | Setaria italica |
Protein
| Length | 550aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA207554 |
| db_source | XM_012847923.2 |
| Definition | signal recognition particle 54 kDa protein, chloroplastic [Setaria italica] |
EGGNOG-MAPPER Annotation
| COG_category | U |
| Description | SRP54-type protein, helical bundle domain |
| KEGG_TC | 3.A.5.1,3.A.5.2,3.A.5.7,3.A.5.8,3.A.5.9 |
| KEGG_Module |
M00335
[VIEW IN KEGG] |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko00002 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko02044 [VIEW IN KEGG] |
| KEGG_ko |
ko:K03106
[VIEW IN KEGG] |
| EC |
3.6.5.4
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway |
ko02024
[VIEW IN KEGG] ko03060 [VIEW IN KEGG] ko03070 [VIEW IN KEGG] map02024 [VIEW IN KEGG] map03060 [VIEW IN KEGG] map03070 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGGACGCCACCGCGCTCGCGCTCCACTCTCCCCCGGCGGCGGTGGTCACCCGCTGCTCCCCGGAGAAGCTAGCCTTCGCCTCCCTACACCTTCGCTGCTCCTCCACAGGGTCGTTCCACCTCCGCGCGTCCCGGAACCCCGCCTTGCGCGCCCTCTCTCTGGGATGGAGGAGACGCAGGAGGAGGGGGAACGGGCTGGTTGTGCGGGCGGAGATGTTTGGGCAGCTCACCACGGGACTCGAGTCCGCCTGGAACAAGCTGCGTGGCGTCGACGTGCTAACAAAGGAAAATATCACTGAACCAATGCGGGACATTAGAAGGTCACTTCTGGAAGCAGATGTTAGTCTGCCAGTTGTGAGACGTTTTGTTTCATCCATTAGCGAAAAGGCTTTAGGTGCAGATACTATCAAAGGAGTTCGACCAGACCAGCAACTAGTGAAGATTGTGCATGACGAACTTGTACAACTGATGGGTGGAGAAGTATCTGATCTGGTATTTGCAAAAAGTGGCCCGACAGTTATCTTACTGGCAGGTCTACAAGGTGTTGGGAAGACTACTGTTTGTGCAAAGCTTGCATTCTATTTGAAGAAACTGGGGAAGAGCTGTATGCTGGTCGCTGCAGATGTTTACAGGCCTGCTGCCATTGATCAACTTACTATACTGGGTGAACAGGTGGGTGTACCAGTTTACTCAGAAGGAATGGGGGCCAAACCTCCACAGATAACCAAGAATGCTGTGGAAGAAGCGAAAAGCAAGAATATTGATGCCATTGTGGTAGATACTGCTGGAAGACTGCAGATTGATAAAGCGATGATGGATGAACTGAAAGAAGTGAAGAAGGCAGTTAATCCTACTGAGGTACTGCTTGTTGTTGATGCCATGACTGGCCAAGAAGCTGCAGCACTTGTCACCACCTTCAATATTGAGATTGGTATCACTGGAGCCATACTTACTAAACTGGACGGTGATTCCAGGGGTGGAGCAGCACTAAGTGTTAAAGAGGTATCTGGAAGGCCCATTAAATTTGTAGGACGCGGAGAACGATTGGAGGACCTCGAGCTTTTCTATCCTGATCGCATGGCGCAACGAGTTTTGGGAATGGGAGATGTACTTTCATTTGTCGAAAAAGCACAAGAAGTTATGCGGCAAGAAGAAGCTGTAGAATTACAGAAGAAAATTATGAGTGCAAAGTTCGACTTCAATGACTTCTTAAAGCAATCTCAAAATGTTGCAAAGATGGGTTCCATGAGCCGAGTAATTGGGATGATTCCTGGCATGAACAAGGTTACTCCTGCACAAATAAGGGAAGCTGAGAAAAGACTTGCATTTGTGGAGTCAATGATTAATGCAATGACTGCCGAGGAAAGAGAGAAGCCTGAGTTACTAGCCGAATCACGTGAAAGGAGGATAAGAGTGGCTGAGGAGTCTGGAAAGACCGAGCAAGAGGTGAGCCAACTGGTTGCTCAACTTTTCCAAATGCGTGCTCAGATGCAGAAATTGATGGGTATGGTGCAAGGACAAGAAGCAATAGCAGGCATGGGAGACCTCATGGACTCACTTAAAGCTGAAGAAAAGGCACCACCTGGCACCGCACGGCGGAGGAGGAGGAACATCAAGCCGAAGCAGAGGAACCTGGATGCAGTTTTGAGCTAG |
| Protein: MDATALALHSPPAAVVTRCSPEKLAFASLHLRCSSTGSFHLRASRNPALRALSLGWRRRRRRGNGLVVRAEMFGQLTTGLESAWNKLRGVDVLTKENITEPMRDIRRSLLEADVSLPVVRRFVSSISEKALGADTIKGVRPDQQLVKIVHDELVQLMGGEVSDLVFAKSGPTVILLAGLQGVGKTTVCAKLAFYLKKLGKSCMLVAADVYRPAAIDQLTILGEQVGVPVYSEGMGAKPPQITKNAVEEAKSKNIDAIVVDTAGRLQIDKAMMDELKEVKKAVNPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGRPIKFVGRGERLEDLELFYPDRMAQRVLGMGDVLSFVEKAQEVMRQEEAVELQKKIMSAKFDFNDFLKQSQNVAKMGSMSRVIGMIPGMNKVTPAQIREAEKRLAFVESMINAMTAEEREKPELLAESRERRIRVAEESGKTEQEVSQLVAQLFQMRAQMQKLMGMVQGQEAIAGMGDLMDSLKAEEKAPPGTARRRRRNIKPKQRNLDAVLS |